Stem-loop gga-mir-12250

Accession

MI0040714

Description

Gallus gallus gga-mir-12250 precursor miRNA

Sequence

gcAGGGGAUGGAGCCGAGUGCCACAgcugaccccacaccaCGUGCUCUGCUCUCUCCCCAGc
((.(((((.(((((.((((((......((....))......)))))).))))).))))).))

Structure

  A     U     C      CACAgc  a 
gc GGGGA GGAGC GAGUGC      ug c
|| ||||| ||||| ||||||      ||  
cG CCCCU UCUCG CUCGUG      ac c
  A     C     U      Caccac  c 

Annotation confidence Not enough data

Genome context

chr24: 5109319-5109380 [+]

Mature gga-miR-12250-5p

• Accession: MIMAT0049989
• Description: Gallus gallus gga-miR-12250-5p mature miRNA
• Sequence: 3 - AGGGGAUGGAGCCGAGUGCCACA - 25
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12250-3p

• Accession: MIMAT0049990
• Description: Gallus gallus gga-miR-12250-3p mature miRNA
• Sequence: 41 - CGUGCUCUGCUCUCUCCCCAG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973