Stem-loop gga-mir-12235

Accession

MI0040696

Description

Gallus gallus gga-mir-12235 precursor miRNA

Sequence

3 reads, 0 reads per million, 2 experiments

UGUGUGUGAGCGGGGGGGGGCCGGgugccgucgcgccccgcgUCACUCAGCCCUCCGUUUGCCCGC
.(((.((((((((((((..((.((((((....)))))).)).........)))))))))))).)))

Structure

U   U            -------GG  C      c 
 GUG GUGAGCGGGGGG         GC GGgugc g
 ||| ||||||||||||         || ||||||  
 CGC CGUUUGCCUCCC         cg cccgcg u
-   C            GACUCACUg  c      c 

Annotation confidence Not enough data

Genome context

chr19: 6062848-6062913 [-]

Mature gga-miR-12235-5p

• Accession: MIMAT0049958
• Description: Gallus gallus gga-miR-12235-5p mature miRNA
• Sequence: 1 - UGUGUGUGAGCGGGGGGGGGCCGG - 24
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12235-3p

• Accession: MIMAT0049959
• Description: Gallus gallus gga-miR-12235-3p mature miRNA
• Sequence: 43 - UCACUCAGCCCUCCGUUUGCCCGC - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973