Stem-loop aof-MIR12137

Accession

MI0040514

Description

Asparagus officinalis aof-MIR12137 precursor miRNA

Sequence

acuaguccacCAUCCUUCAAGAUCGAGGUCUggaccaauacucagaguauucgacucacccucaaaaaaagagagucccucauuaucacuaaaaaucuugaccaccuugugacuugguacuagaaggaucggacgaaa
....((((...(((((((.((((((((.(((((........)))))......(((((...............)))))........((((...................)))))))))).)).))))))).))))....

Structure

acua    acC       A  -      -----------------------------------------------------------------G     acc 
    gucc   AUCCUUC AG AUCGAG                                                                  UCUgg   a
    ||||   ||||||| || ||||||                                                                  |||||    
    cagg   uaggaag uc ugguuc                                                                  agacu   a
aaag    --c       a  a      aguguuccaccaguucuaaaaaucacuauuacucccugagagaaaaaaacucccacucagcuuaug     cau 

Annotation confidence Not enough data

Genome context

chr3: 36573522-36573659 [+]

Mature aof-miR12137

• Accession: MIMAT0049720
• Description: Asparagus officinalis aof-miR12137 mature miRNA
• Sequence: 11 - CAUCCUUCAAGAUCGAGGUCU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29093472
   The asparagus genome sheds light on the origin and evolution of a young Y chromosome
   Harkess A, Zhou J, Xu C, Bowers JE, Van der Hulst R, Ayyampalayam S, Mercati F, Riccardi P, McKain MR, Kakrana A, Tang H, Ray J, Groenendijk J, Arikit S, Mathioni SM, Nakano M, Shan H, Telgmann-Rauber A, Kanno A, Yue Z, Chen H, Li W, Chen Y, Xu X, Zhang Y
   Nat Commun (2017) 8:1279