miRBase entry: mmr-mir-3959

Stem-loop mmr-mir-3959


Accession
MI0039910
Description
Microcebus murinus mmr-mir-3959 precursor miRNA


Sequence

547 reads, 116.0 reads per million, 8 experiments
GGUUGAUCAGAGAACAUACAUUuuauaaaugaUGUAUGUCAACUGAUCCACAGU
.((.((((((...(((((((((........)))))))))...)))))).))...

Structure
--G  U      AGA         uua 
   GU GAUCAG   ACAUACAUU   u
   || ||||||   |||||||||    
   CA CUAGUC   UGUAUGUag   a
UGA  C      AAC         uaa 


Annotation confidence High
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Genome context
chr3: 12745610-12745663 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmr-mir-3959
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmr-miR-3959-5p

Accession MIMAT0060625
Description Microcebus murinus mmr-miR-3959-5p mature miRNA
Sequence 1 - GGUUGAUCAGAGAACAUACAUU - 22
Evidence experimental
Illumina [1]

Mature mmr-miR-3959-3p

Accession MIMAT0049191
Description Microcebus murinus mmr-miR-3959-3p mature miRNA
Sequence 33 - UGUAUGUCAACUGAUCCACAGU - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596