Stem-loop csi-MIR169q

Accession

MI0039707

Description

Citrus sinensis csi-MIR169q precursor miRNA

Literature search

5 open access papers mention csi-MIR169q
(12 sentences)

Sequence

guuugaUAGCCAAGGAUGACUUGCCUugcuucuaaagaaaggucucucaaguuuaacuuagcuacauguacagcaagaauccuugugcagguucuagggcaagucgucuugggcuaucuugacaggc
(((.(((((((.((((((((((((((((...((.....((((..(((...(((..((..........))..))).)))..)))).....))...)))))))))))))))).)))))))..)))....

Structure

----   -u       A                cuu  aaaga    uc   caa   ua  uuag 
    guu  gaUAGCC AGGAUGACUUGCCUug   cu     aagg  ucu   guu  ac    c
    |||  ||||||| ||||||||||||||||   ||     ||||  |||   |||  ||     
    cag  cuaucgg uucugcugaacgggau   gg     uucc  aga   cga  ug    u
cgga   uu       g                cuu  acgug    ua   --a   ca  uaca 

Annotation confidence Low

Genome context

chr6: 14238837-14238963 [-]

Mature csi-miR169q-5p

• Accession: MIMAT0048997
• Description: Citrus sinensis csi-miR169q-5p mature miRNA
• Sequence: 7 - UAGCCAAGGAUGACUUGCCU - 26
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113