Stem-loop csi-MIR156h

Accession

MI0039701

Description

Citrus sinensis csi-MIR156h precursor miRNA

Literature search

7 open access papers mention csi-MIR156h
(37 sentences)

Sequence

gaacuuuuguugACAGAAGAUAGAGAACACAUAaauuaaaaugccauuaaucaaacgcauuuuaaaucuuugugcucucuauauucugucaucaacgugca
......(((.((((((((.(((((((.((((....(((((((((............))))))))).....)))).))))))).)))))))).)))......

Structure

gaacuu   u        G       A    -UAaa         cauua 
      uug ugACAGAA AUAGAGA CACA     uuaaaaugc     a
      ||| |||||||| ||||||| ||||     |||||||||      
      aac acugucuu uaucucu gugu     aauuuuacg     u
acgugc   u        a       c    uucua         caaac 

Annotation confidence Not enough data

Genome context

chr2: 10039848-10039948 [+]

Mature csi-miR156h-5p

• Accession: MIMAT0048989
• Description: Citrus sinensis csi-miR156h-5p mature miRNA
• Sequence: 13 - ACAGAAGAUAGAGAACACAUA - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113