Stem-loop csi-MIR156d

Accession

MI0039617

Description

Citrus sinensis csi-MIR156d precursor miRNA

Literature search

7 open access papers mention csi-MIR156d
(36 sentences)

Sequence

gaaauuuuguUGACAGAAGAUAGAGAGCGCauaaauuaaaaugccauuaagcaaacgcauuuuaaaucuuugugcucucuguauucugucaucaacgugca
......(((.((((((((.((((((((((((....(((((((((............))))))))).....)))))))))))).)))))))).)))......

Structure

gaaauu   u        G            -uaaa         cauua 
      uug UGACAGAA AUAGAGAGCGCa     uuaaaaugc     a
      ||| |||||||| ||||||||||||     |||||||||      
      aac acugucuu ugucucucgugu     aauuuuacg     g
acgugc   u        a            uucua         caaac 

Annotation confidence Not enough data

Genome context

chr2: 10012779-10012879 [+]

Mature csi-miR156d-5p

• Accession: MIMAT0048854
• Description: Citrus sinensis csi-miR156d-5p mature miRNA
• Sequence: 11 - UGACAGAAGAUAGAGAGCGC - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113