miRBase entry: dre-mir-128-3

Stem-loop dre-mir-128-3


Accession
MI0039520
Description
Danio rerio dre-mir-128-3 precursor miRNA

Literature search
5 open access papers mention dre-mir-128-3
(9 sentences)

Sequence

4727 reads, 246 reads per million, 11 experiments
gagcggcugaaugCGGGGCCGUGGCGCUGUCUGAGAcgcucuacuauucUCACAGUGAACCGGUCUCUUUUccagccgcuc
(((((((((.....(((((((...((((((..((((...........))))))))))...))))))).....)))))))))

Structure
         aaugC       UGG      CU    cgcu 
gagcggcug     GGGGCCG   CGCUGU  GAGA    c
|||||||||     |||||||   ||||||  ||||    u
cucgccgac     CUCUGGC   GUGACA  CUcu    a
         cUUUU       CAA      --    uauc 


Annotation confidence Not enough data
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Genome context
KN150366.1: 5626-5706 [-]

Database links

Mature dre-miR-128-3p

Accession MIMAT0001824
Description Danio rerio dre-miR-128-3p mature miRNA
Sequence 50 - UCACAGUGAACCGGUCUCUUUU - 71
Evidence experimental
cloned [1]

Mature dre-miR-128-3-5p

Accession MIMAT0048666
Description Danio rerio dre-miR-128-3-5p mature miRNA
Sequence 14 - CGGGGCCGUGGCGCUGUCUGAGA - 36
Evidence not_experimental

References

  1. PubMed ID: 26473382
    A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome
    "Fromm B, Billipp T, Peck LE, Johansen M, Tarver JE, King BL, Newcomb JM, Sempere LF, Flatmark K, Hovig E, Peterson KJ"
    "Annu Rev Genet (2015) 49:213-242