miRBase entry: ocu-mir-599

Stem-loop ocu-mir-599

Accession

MI0039451

Description

Oryctolagus cuniculus ocu-mir-599 precursor miRNA

Sequence

UUUGAUAAGCCGACAUGGGACAgggacucuuuucacugUUGUGUCAGUUUAUCAAACC
((((((((((.(((((..((((((((.....))).)))))))))).))))))))))..

Structure

--          C     GG     -   c 
  UUUGAUAAGC GACAU  GACAg gga u
  |||||||||| |||||  ||||| ||| c
  AAACUAUUUG CUGUG  UUguc cuu u
CC          A     --     a   u

Annotation confidence Not enough data

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Genome context

CM000792.1: 115199370-115199427 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-599

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-599-5p

Accession	MIMAT0048537
Description	Oryctolagus cuniculus ocu-miR-599-5p mature miRNA
Sequence	1 - UUUGAUAAGCCGACAUGGGACA - 22
Evidence	experimental Illumina [1]

Mature ocu-miR-599-3p

Accession	MIMAT0048538
Description	Oryctolagus cuniculus ocu-miR-599-3p mature miRNA
Sequence	39 - UUGUGUCAGUUUAUCAAACC - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344