miRBase entry: ocu-mir-532

Stem-loop ocu-mir-532


Accession
MI0039442
Description
Oryctolagus cuniculus ocu-mir-532 precursor miRNA


Sequence

CAUGCCUUGAGUGUAGGACUGUuggaaucuuaauuacCCUCCCACACCCAAGGCUUGCA
((.((((((.((((.(((..((.............))..))).)))).)))))).))..

Structure
--  U      A    A   CU  uggaa 
  CA GCCUUG GUGU GGA  GU     u
  || |||||| |||| |||  ||     c
  GU CGGAAC CACA CCU  ca     u
AC  U      C    C   CC  uuaau 


Annotation confidence Not enough data
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Genome context
CM000811.1: 34232287-34232345 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from ocu-mir-532
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-532-5p

Accession MIMAT0048519
Description Oryctolagus cuniculus ocu-miR-532-5p mature miRNA
Sequence 1 - CAUGCCUUGAGUGUAGGACUGU - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-532-3p

Accession MIMAT0048520
Description Oryctolagus cuniculus ocu-miR-532-3p mature miRNA
Sequence 38 - CCUCCCACACCCAAGGCUUGCA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344