Stem-loop ocu-mir-509c

Accession

MI0039441

Description

Oryctolagus cuniculus ocu-mir-509c precursor miRNA

Sequence

UACUCAAGACAGUGGCAAUCAUGuauaauuaaauaUGAUUGACACGUCUAUGAGUGGA
((((((((((.(((.(((((((((........))))))))).))))))).))))))..

Structure

--      -    A   G         aua 
  UACUCA AGAC GUG CAAUCAUGu   a
  |||||| |||| ||| |||||||||    
  GUGAGU UCUG CAC GUUAGUaua   u
AG      A    -   A         aau 

Annotation confidence Not enough data

Genome context

GL018700.1: 10687771-10687828 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from ocu-mir-509c

Mature ocu-miR-509c-5p

• Accession: MIMAT0048517
• Description: Oryctolagus cuniculus ocu-miR-509c-5p mature miRNA
• Sequence: 1 - UACUCAAGACAGUGGCAAUCAUG - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-509c-3p

• Accession: MIMAT0048518
• Description: Oryctolagus cuniculus ocu-miR-509c-3p mature miRNA
• Sequence: 36 - UGAUUGACACGUCUAUGAGUGGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344