miRBase entry: ocu-mir-508

Stem-loop ocu-mir-508


Accession
MI0039437
Description
Oryctolagus cuniculus ocu-mir-508 precursor miRNA


Sequence

UACUCCAGAGGGUGUCACUCAcauugccuaaagcaugAUUGUCACCUUUUUGAGUAGA
(((((.((((((((.((.(((...(((.....)))))).)).)))))))).)))))..

Structure
--     C        U  C   cau   c 
  UACUC AGAGGGUG CA UCA   ugc u
  ||||| |||||||| || |||   ||| a
  AUGAG UUUUCCAC GU Agu   acg a
AG     U        U  U   ---   a 


Annotation confidence Not enough data
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Genome context
GL018700.1: 10705716-10705773 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ocu-mir-508
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-508-5p

Accession MIMAT0048509
Description Oryctolagus cuniculus ocu-miR-508-5p mature miRNA
Sequence 1 - UACUCCAGAGGGUGUCACUCA - 21
Evidence experimental
Illumina [1]

Mature ocu-miR-508-3p

Accession MIMAT0048510
Description Oryctolagus cuniculus ocu-miR-508-3p mature miRNA
Sequence 38 - AUUGUCACCUUUUUGAGUAGA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344