miRBase entry: ocu-mir-503

Stem-loop ocu-mir-503


Accession
MI0039432
Description
Oryctolagus cuniculus ocu-mir-503 precursor miRNA


Sequence

UAGCAGCGGGAACAGUACUGCagugagcuauaggacuucuGGAGUAUUGCUUCUGCUGCCAGGg
..(((((((((.(((((((.(((.(((((...)).)))))).))))))).))))))))).....

Structure
---UA         A       G   u   -  a 
     GCAGCGGGA CAGUACU Cag gag cu  
     ||||||||| ||||||| ||| ||| || u
     CGUCGUCUU GUUAUGA Guc uuc gg  
gGGAC         C       G   -   a  a 


Annotation confidence Not enough data
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Genome context
CM000811.1: 108855772-108855835 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from ocu-mir-503
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-503-5p

Accession MIMAT0048499
Description Oryctolagus cuniculus ocu-miR-503-5p mature miRNA
Sequence 1 - UAGCAGCGGGAACAGUACUGC - 21
Evidence experimental
Illumina [1]

Mature ocu-miR-503-3p

Accession MIMAT0048500
Description Oryctolagus cuniculus ocu-miR-503-3p mature miRNA
Sequence 41 - GGAGUAUUGCUUCUGCUGCCAGG - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344