Stem-loop ocu-mir-502b

Accession

MI0039431

Description

Oryctolagus cuniculus ocu-mir-502b precursor miRNA

Sequence

UAAUCCUUGAUACCUGGUGUUAGUgcuuucuaugugcAAUGCACCUGGGCAAGGAUUUAGA
.((((((((...((.(((((..((((.......))))...))))).)).))))))))....

Structure

---U        AUA  U     -UA    uu 
    AAUCCUUG   CC GGUGU   GUgc  u
    ||||||||   || |||||   ||||  c
    UUAGGAAC   GG CCACG   cgug  u
AGAU        --G  U     UAA    ua 

Annotation confidence Low

Genome context

CM000811.1: 34235397-34235457 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ocu-mir-502b

Mature ocu-miR-502b-5p

• Accession: MIMAT0048497
• Description: Oryctolagus cuniculus ocu-miR-502b-5p mature miRNA
• Sequence: 1 - UAAUCCUUGAUACCUGGUGUUAGU - 24
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-502b-3p

• Accession: MIMAT0048498
• Description: Oryctolagus cuniculus ocu-miR-502b-3p mature miRNA
• Sequence: 38 - AAUGCACCUGGGCAAGGAUUUAGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344