Stem-loop ocu-mir-488

Accession

MI0039420

Description

Oryctolagus cuniculus ocu-mir-488 precursor miRNA

Sequence

CCCAGAUAAUGGCACCCUCAAACcaguguccaguuguUUGAAAGGCUAUUUCUUGGUC
.((((..((((((.(..((((((.(........).))))))..)))))))..))))..

Structure

-C    AU      A CC      c gug 
  CCAG  AAUGGC C  UCAAAC a   u
  ||||  |||||| |  |||||| |    
  GGUU  UUAUCG G  AGUUug u   c
CU    CU      - AA      u gac 

Annotation confidence Not enough data

Genome context

CM000802.1: 4108648-4108705 [-]

Mature ocu-miR-488-5p

• Accession: MIMAT0048475
• Description: Oryctolagus cuniculus ocu-miR-488-5p mature miRNA
• Sequence: 1 - CCCAGAUAAUGGCACCCUCAAAC - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-488-3p

• Accession: MIMAT0048476
• Description: Oryctolagus cuniculus ocu-miR-488-3p mature miRNA
• Sequence: 38 - UUGAAAGGCUAUUUCUUGGUC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344