Stem-loop ocu-mir-383

Accession

MI0039396

Description

Oryctolagus cuniculus ocu-mir-383 precursor miRNA

Literature search

12 open access papers mention ocu-mir-383
(221 sentences)

Sequence

5506 reads, 33.0 reads per million, 36 experiments

AGAUCAGAAGGUGAUUGUGGCUUuggguggauagcaaucagCCACAGCACUGCCUGGUCAGA
.((((((..((((.((((((((....((.....))....))))))))))))..))))))...

Structure

--A      AA    A        Uugg  g 
   GAUCAG  GGUG UUGUGGCU    gu g
   ||||||  |||| ||||||||    || a
   CUGGUC  UCAC GACACCga    cg u
AGA      CG    -        cuaa  a 

Annotation confidence High

Genome context

GL018709.1: 835693-835754 [+]

Mature ocu-miR-383-5p

• Accession: MIMAT0048429
• Description: Oryctolagus cuniculus ocu-miR-383-5p mature miRNA
• Sequence: 1 - AGAUCAGAAGGUGAUUGUGGCUU - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-383-3p

• Accession: MIMAT0048430
• Description: Oryctolagus cuniculus ocu-miR-383-3p mature miRNA
• Sequence: 42 - CCACAGCACUGCCUGGUCAGA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344