Stem-loop ocu-mir-377

Accession

MI0039391

Description

Oryctolagus cuniculus ocu-mir-377 precursor miRNA

Sequence

AGAGGUUGCCCUUGGUGAAUUCgcuuuauugauguugaAUCACACAAAGGCAACUUUUGU
((((((((((.(((((((.(((((.........).)))))))).))).))))))))))..

Structure

--          C   -    A    - uuu 
  AGAGGUUGCC UUG GUGA UUCg c   a
  |||||||||| ||| |||| |||| |   u
  UUUUCAACGG AAC CACU Aagu g   u
UG          A   A    -    u uag 

Annotation confidence Not enough data

Genome context

GL019048.1: 150228-150287 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from ocu-mir-377

Mature ocu-miR-377-5p

• Accession: MIMAT0048419
• Description: Oryctolagus cuniculus ocu-miR-377-5p mature miRNA
• Sequence: 1 - AGAGGUUGCCCUUGGUGAAUUC - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-377-3p

• Accession: MIMAT0048420
• Description: Oryctolagus cuniculus ocu-miR-377-3p mature miRNA
• Sequence: 39 - AUCACACAAAGGCAACUUUUGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344