miRBase entry: ocu-mir-376a

Stem-loop ocu-mir-376a


Accession
MI0039387
Description
Oryctolagus cuniculus ocu-mir-376a precursor miRNA


Sequence

GUAGAUUCUCCUUCUAUGAGUacauuauuuaugauuaAUCAUAGAGGAAAAUCCACGU
((.((((.((((.((((((...(((.....))).....)))))))))).)))).))..

Structure
--  A    C    U      --GUa   u 
  GU GAUU UCCU CUAUGA     cau a
  || |||| |||| ||||||     ||| u
  CA CUAA AGGA GAUACU     gua u
UG  C    A    -      Aauua   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL019048.1: 133845-133902 [+]
Clustered miRNAs
18 other miRNAs are < 10 kb from ocu-mir-376a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-376a-5p

Accession MIMAT0048412
Description Oryctolagus cuniculus ocu-miR-376a-5p mature miRNA
Sequence 1 - GUAGAUUCUCCUUCUAUGAGU - 21
Evidence experimental
Illumina [1]

Mature ocu-miR-376a-3p

Accession MIMAT0048413
Description Oryctolagus cuniculus ocu-miR-376a-3p mature miRNA
Sequence 38 - AUCAUAGAGGAAAAUCCACGU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344