Stem-loop ocu-mir-340

Accession

MI0039373

Description

Oryctolagus cuniculus ocu-mir-340 precursor miRNA

Sequence

UUAUAAAGCAAUGAGACUGAUUgucauauguuguucaugggaUCCGUCUCAGUUACUUUAUAGCC
((((((((...((((((.((((.(...(((.....)))).)))).))))))....))))))))..

Structure

--        -CAA      U    g cau   u 
  UUAUAAAG    UGAGAC GAUU u   aug u
  ||||||||    |||||| |||| |   ||| g
  GAUAUUUC    ACUCUG CUag g   uac u
CC        AUUG      C    g ---   u 

Annotation confidence Not enough data

Genome context

GL018730.1: 1482725-1482789 [-]

Mature ocu-miR-340-5p

• Accession: MIMAT0048386
• Description: Oryctolagus cuniculus ocu-miR-340-5p mature miRNA
• Sequence: 1 - UUAUAAAGCAAUGAGACUGAUU - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-340-3p

• Accession: MIMAT0048387
• Description: Oryctolagus cuniculus ocu-miR-340-3p mature miRNA
• Sequence: 43 - UCCGUCUCAGUUACUUUAUAGCC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344