miRBase entry: ocu-mir-340

Stem-loop ocu-mir-340


Accession
MI0039373
Description
Oryctolagus cuniculus ocu-mir-340 precursor miRNA


Sequence

UUAUAAAGCAAUGAGACUGAUUgucauauguuguucaugggaUCCGUCUCAGUUACUUUAUAGCC
((((((((...((((((.((((.(...(((.....)))).)))).))))))....))))))))..

Structure
--        -CAA      U    g cau   u 
  UUAUAAAG    UGAGAC GAUU u   aug u
  ||||||||    |||||| |||| |   ||| g
  GAUAUUUC    ACUCUG CUag g   uac u
CC        AUUG      C    g ---   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL018730.1: 1482725-1482789 [-]

Database links

Mature ocu-miR-340-5p

Accession MIMAT0048386
Description Oryctolagus cuniculus ocu-miR-340-5p mature miRNA
Sequence 1 - UUAUAAAGCAAUGAGACUGAUU - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-340-3p

Accession MIMAT0048387
Description Oryctolagus cuniculus ocu-miR-340-3p mature miRNA
Sequence 43 - UCCGUCUCAGUUACUUUAUAGCC - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344