Stem-loop ocu-mir-329

Accession

MI0039369

Description

Oryctolagus cuniculus ocu-mir-329 precursor miRNA

Sequence

AGAGGUUUUCUGGGUUUCUGUUUCuuggaugaggaugaAACACACCUGGUUAGCCUCUUU
(((((((..((((((...((((((............)))))).))))))..)))))))..

Structure

--       UU      UUC      uugga 
  AGAGGUU  CUGGGU   UGUUUC     u
  |||||||  ||||||   ||||||      
  UCUCCGA  GGUCCA   ACAAag     g
UU       UU      --C      uagga 

Annotation confidence Not enough data

Genome context

GL019048.1: 126028-126087 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from ocu-mir-329

Mature ocu-miR-329-5p

• Accession: MIMAT0048378
• Description: Oryctolagus cuniculus ocu-miR-329-5p mature miRNA
• Sequence: 1 - AGAGGUUUUCUGGGUUUCUGUUUC - 24
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-329-3p

• Accession: MIMAT0048379
• Description: Oryctolagus cuniculus ocu-miR-329-3p mature miRNA
• Sequence: 39 - AACACACCUGGUUAGCCUCUUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344