miRBase entry: ocu-mir-219a

Stem-loop ocu-mir-219a


Accession
MI0039355
Description
Oryctolagus cuniculus ocu-mir-219a precursor miRNA


Sequence

UGAUUGUCCAAACGCAAUUCUCGagucuauggcuccggccgAGAGUUGGGUUUGGACGUCCCG
.(((.((((((((.(((((((((.(((.........)))))))))))).)))))))))))...

Structure
--U   U        G         a   uau 
   GAU GUCCAAAC CAAUUCUCG guc   g
   ||| |||||||| ||||||||| |||   g
   CUG CAGGUUUG GUUGAGAgc cgg   c
GCC   -        G         -   ccu 


Annotation confidence Not enough data
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Genome context
CM000801.1: 23632838-23632900 [+]

Database links

Mature ocu-miR-219a-5p

Accession MIMAT0048350
Description Oryctolagus cuniculus ocu-miR-219a-5p mature miRNA
Sequence 1 - UGAUUGUCCAAACGCAAUUCUCG - 23
Evidence experimental
Illumina [1]

Mature ocu-miR-219a-3p

Accession MIMAT0048351
Description Oryctolagus cuniculus ocu-miR-219a-3p mature miRNA
Sequence 42 - AGAGUUGGGUUUGGACGUCCCG - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344