miRBase entry: ocu-mir-206

Stem-loop ocu-mir-206


Accession
MI0039343
Description
Oryctolagus cuniculus ocu-mir-206 precursor miRNA


Sequence

ACAUGCUUCUUUAUAUCCCCAUAcggauuacuuugcuaUGGAAUGUAAGGAAGUGUGUGG
((((((((((((((((..(((((((((....)))).))))).))))))))))))))))..

Structure
--                CC     -    u 
  ACAUGCUUCUUUAUAU  CCAUA cgga u
  ||||||||||||||||  ||||| ||||  
  UGUGUGAAGGAAUGUA  GGUau guuu a
GG                -A     c    c 


Annotation confidence Not enough data
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Genome context
CM000801.1: 41638561-41638620 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ocu-mir-206
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-206-5p

Accession MIMAT0048327
Description Oryctolagus cuniculus ocu-miR-206-5p mature miRNA
Sequence 1 - ACAUGCUUCUUUAUAUCCCCAUA - 23
Evidence experimental
Illumina [1]

Mature ocu-miR-206-3p

Accession MIMAT0048328
Description Oryctolagus cuniculus ocu-miR-206-3p mature miRNA
Sequence 39 - UGGAAUGUAAGGAAGUGUGUGG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344