miRBase entry: ocu-mir-197

Stem-loop ocu-mir-197


Accession
MI0039337
Description
Oryctolagus cuniculus ocu-mir-197 precursor miRNA


Sequence

UGGGUAGAGAGGGUAGUGGGAGGuaagagcucuucacccUUCACCACCUUCUCCACCCAGC
(((((.((((((((.(((((.((((((....))).))).))))).)))))))).)))))..

Structure
--     A        A     A   -   a 
  UGGGU GAGAGGGU GUGGG GGu aag g
  ||||| |||||||| ||||| ||| |||  
  ACCCA CUCUUCCA CACUU cca uuc c
CG     C        C     c   c   u 


Annotation confidence Not enough data
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Genome context
CM000802.1: 54594236-54594296 [-]

Database links

Mature ocu-miR-197-5p

Accession MIMAT0048317
Description Oryctolagus cuniculus ocu-miR-197-5p mature miRNA
Sequence 1 - UGGGUAGAGAGGGUAGUGGGAGG - 23
Evidence experimental
Illumina [1]

Mature ocu-miR-197-3p

Accession MIMAT0048318
Description Oryctolagus cuniculus ocu-miR-197-3p mature miRNA
Sequence 40 - UUCACCACCUUCUCCACCCAGC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344