Stem-loop ocu-mir-196a-1

Accession

MI0039334

Description

Oryctolagus cuniculus ocu-mir-196a-1 precursor miRNA

Literature search

1 open access papers mention ocu-mir-196a-1
(1 sentences)

Sequence

UAGGUAGUUUCAUGUUGUUGGGccugggucucugaacaCAACGACAUGGAACCACCUGAC
(((((.(((((((((((((((..(.........)..).)))))))))))))).)))))..

Structure

--     A              - Gc ugg 
  UAGGU GUUUCAUGUUGUUG G  c   g
  ||||| |||||||||||||| |  |   u
  GUCCA CAAGGUACAGCAAC c  g   c
CA     C              a aa ucu 

Annotation confidence Not enough data

Genome context

CM000808.1: 38730720-38730779 [+]

Mature ocu-miR-196a-5p

• Accession: MIMAT0048311
• Description: Oryctolagus cuniculus ocu-miR-196a-5p mature miRNA
• Sequence: 1 - UAGGUAGUUUCAUGUUGUUGGG - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-196a-3p

• Accession: MIMAT0048312
• Description: Oryctolagus cuniculus ocu-miR-196a-3p mature miRNA
• Sequence: 39 - CAACGACAUGGAACCACCUGAC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344