Stem-loop ocu-mir-182

Accession

MI0039321

Description

Oryctolagus cuniculus ocu-mir-182 precursor miRNA

Sequence

UUUGGCAAUGGUAGAACUCACACUggugagguaugggauccggUGGUUCUAGACUUGCCAACUA
.(((((((...((((((...((((((.............))))))))))))...)))))))...

Structure

--U       UGG      UCA      ugagg 
   UUGGCAA   UAGAAC   CACUgg     u
   |||||||   ||||||   ||||||     a
   AACCGUU   AUCUUG   GUggcc     u
AUC       CAG      ---      uaggg 

Annotation confidence Not enough data

Genome context

CM000796.1: 14830047-14830110 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ocu-mir-182

Mature ocu-miR-182-5p

• Accession: MIMAT0048285
• Description: Oryctolagus cuniculus ocu-miR-182-5p mature miRNA
• Sequence: 1 - UUUGGCAAUGGUAGAACUCACACU - 24
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-182-3p

• Accession: MIMAT0048286
• Description: Oryctolagus cuniculus ocu-miR-182-3p mature miRNA
• Sequence: 44 - UGGUUCUAGACUUGCCAACUA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344