miRBase entry: ocu-mir-181b-1

Stem-loop ocu-mir-181b-1

Accession

MI0039317

Description

Oryctolagus cuniculus ocu-mir-181b-1 precursor miRNA

Sequence

AACAUUCAUUGCUGUCGGUGGGUUgaacuguguggacaagCUCACUGAACAAUGAAUGCAA
..(((((((((...((((((((((....(((....))))))))))))).)))))))))...

Structure

-AA         CUG          gaac   g 
   CAUUCAUUG   UCGGUGGGUU    ugu u
   |||||||||   ||||||||||    |||  
   GUAAGUAAC   AGUCACUCga    aca g
AAC         --A          ----   g

Annotation confidence Not enough data

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Genome context

CM000805.1: 72388964-72389024 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-181b-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-181b-5p

Accession	MIMAT0048278
Description	Oryctolagus cuniculus ocu-miR-181b-5p mature miRNA
Sequence	1 - AACAUUCAUUGCUGUCGGUGGGUU - 24
Evidence	experimental Illumina [1]

Mature ocu-miR-181b-3p

Accession	MIMAT0048279
Description	Oryctolagus cuniculus ocu-miR-181b-3p mature miRNA
Sequence	41 - CUCACUGAACAAUGAAUGCAA - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344