miRBase entry: ocu-mir-181b-1

Stem-loop ocu-mir-181b-1


Accession
MI0039317
Description
Oryctolagus cuniculus ocu-mir-181b-1 precursor miRNA


Sequence

AACAUUCAUUGCUGUCGGUGGGUUgaacuguguggacaagCUCACUGAACAAUGAAUGCAA
..(((((((((...((((((((((....(((....))))))))))))).)))))))))...

Structure
-AA         CUG          gaac   g 
   CAUUCAUUG   UCGGUGGGUU    ugu u
   |||||||||   ||||||||||    |||  
   GUAAGUAAC   AGUCACUCga    aca g
AAC         --A          ----   g 


Annotation confidence Not enough data
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Genome context
CM000805.1: 72388964-72389024 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ocu-mir-181b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-181b-5p

Accession MIMAT0048278
Description Oryctolagus cuniculus ocu-miR-181b-5p mature miRNA
Sequence 1 - AACAUUCAUUGCUGUCGGUGGGUU - 24
Evidence experimental
Illumina [1]

Mature ocu-miR-181b-3p

Accession MIMAT0048279
Description Oryctolagus cuniculus ocu-miR-181b-3p mature miRNA
Sequence 41 - CUCACUGAACAAUGAAUGCAA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344