Stem-loop ocu-mir-138-2

Accession

MI0039296

Description

Oryctolagus cuniculus ocu-mir-138-2 precursor miRNA

Sequence

AGCUGGUGUUGUGAAUCAGGCCGacgagcagcgcauccucuuacccgGCUAUUUCACGACACCAGGGU
..(((((((((((((...(((((..(((.((......)))))...)))))..)))))))))))))...

Structure

-AG             UCA     -ac   c  cg 
   CUGGUGUUGUGAA   GGCCG   gag ag  c
   |||||||||||||   |||||   ||| ||   
   GACCACAGCACUU   UCGgc   uuc uc  a
UGG             -UA     cca   -  cu 

Annotation confidence Not enough data

Genome context

CM000794.1: 13100646-13100713 [+]

Mature ocu-miR-138-5p

• Accession: MIMAT0048236
• Description: Oryctolagus cuniculus ocu-miR-138-5p mature miRNA
• Sequence: 1 - AGCUGGUGUUGUGAAUCAGGCCG - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-138-2-3p

• Accession: MIMAT0048238
• Description: Oryctolagus cuniculus ocu-miR-138-2-3p mature miRNA
• Sequence: 48 - GCUAUUUCACGACACCAGGGU - 68
• Evidence: not_experimental

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344