Stem-loop ocu-mir-130b

Accession

MI0039286

Description

Oryctolagus cuniculus ocu-mir-130b precursor miRNA

Sequence

ACUCUUUCCCUGUUGCACUACUguggaccacugggaagCAGUGCAAUGAUGAAAGGGCAU
.(((((((..(((((((((.((.....((...))..)).)))))))))..)))))))...

Structure

--A       CC         A  gugga  a 
   CUCUUUC  UGUUGCACU CU     cc  
   |||||||  ||||||||| ||     || c
   GGGAAAG  GUAACGUGA ga     gg  
UAC       UA         C  ---ag  u 

Annotation confidence Not enough data

Genome context

CM000810.1: 5522961-5523020 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-130b

Mature ocu-miR-130b-5p

• Accession: MIMAT0048219
• Description: Oryctolagus cuniculus ocu-miR-130b-5p mature miRNA
• Sequence: 1 - ACUCUUUCCCUGUUGCACUACU - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-130b-3p

• Accession: MIMAT0048220
• Description: Oryctolagus cuniculus ocu-miR-130b-3p mature miRNA
• Sequence: 39 - CAGUGCAAUGAUGAAAGGGCAU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344