Stem-loop ocu-mir-106a

Accession

MI0039272

Description

Oryctolagus cuniculus ocu-mir-106a precursor miRNA

Sequence

AAAAGUGCUUACAGUGCAGGUAGcuuuuugagaucuACUGCAAUGCGAGCACUUCUUAC
..((((((((.((.(((((.(((.(((...))).)))))))).)).)))))))).....

Structure

---AA        A  G     G   c   u 
     AAGUGCUU CA UGCAG UAG uuu  
     |||||||| || ||||| ||| ||| u
     UUCACGAG GU ACGUC Auc aga  
CAUUC        C  A     -   u   g 

Annotation confidence Not enough data

Genome context

CM000811.1: 108519035-108519093 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from ocu-mir-106a

Mature ocu-miR-106a-5p

• Accession: MIMAT0048195
• Description: Oryctolagus cuniculus ocu-miR-106a-5p mature miRNA
• Sequence: 1 - AAAAGUGCUUACAGUGCAGGUAG - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-106a-3p

• Accession: MIMAT0048196
• Description: Oryctolagus cuniculus ocu-miR-106a-3p mature miRNA
• Sequence: 37 - ACUGCAAUGCGAGCACUUCUUAC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344