Stem-loop ocu-mir-105a-2

Accession

MI0039271

Description

Oryctolagus cuniculus ocu-mir-105a-2 precursor miRNA

Sequence

UCAAAUGCUCAGACUCCUGUGGUGgcugcuuaugcaCCACGGAUGUUUGAGCAUGUGCU
.((.((((((((((..((((((((..........))))))))..)))))))))).))..

Structure

-U  A          UC        gcug 
  CA AUGCUCAGAC  CUGUGGUG    c
  || ||||||||||  ||||||||     
  GU UACGAGUUUG  GGCACCac    u
UC  G          UA        guau 

Annotation confidence Not enough data

Genome context

GL018731.1: 388180-388238 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ocu-mir-105a-2

Mature ocu-miR-105a-5p

• Accession: MIMAT0048192
• Description: Oryctolagus cuniculus ocu-miR-105a-5p mature miRNA
• Sequence: 1 - UCAAAUGCUCAGACUCCUGUGGUG - 24
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-105a-2-3p

• Accession: MIMAT0048194
• Description: Oryctolagus cuniculus ocu-miR-105a-2-3p mature miRNA
• Sequence: 37 - CCACGGAUGUUUGAGCAUGUGCU - 59
• Evidence: not_experimental

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344