Stem-loop ocu-mir-30e

Accession

MI0039252

Description

Oryctolagus cuniculus ocu-mir-30e precursor miRNA

Sequence

UGUAAACAUCCUUGACUGGAAGCUguaagguguuaagaggagCUUUCAGUCGGAUGUUUACAGC
(((((((((((..(((((((((((................))))))))))))))))))))))..

Structure

--           UU           guaaggu 
  UGUAAACAUCC  GACUGGAAGCU       g
  |||||||||||  |||||||||||        
  ACAUUUGUAGG  CUGACUUUCga       u
CG           --           ggagaau 

Annotation confidence Not enough data

Genome context

CM000802.1: 125818449-125818512 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-30e

Mature ocu-miR-30e-5p

• Accession: MIMAT0048159
• Description: Oryctolagus cuniculus ocu-miR-30e-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCUUGACUGGAAGCU - 24
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-30e-3p

• Accession: MIMAT0048160
• Description: Oryctolagus cuniculus ocu-miR-30e-3p mature miRNA
• Sequence: 43 - CUUUCAGUCGGAUGUUUACAGC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344