Stem-loop ocu-mir-30d

Accession

MI0039251

Description

Oryctolagus cuniculus ocu-mir-30d precursor miRNA

Sequence

UGUAAACAUCCCCGACUGGAAGCUguaaaacaacuaagCUUUCAGUCAGAUGUUUGCUGC
.(((((((((...(((((((((((............))))))))))).)))))))))...

Structure

--U         CCC           guaaa 
   GUAAACAUC   GACUGGAAGCU     a
   |||||||||   |||||||||||      
   CGUUUGUAG   CUGACUUUCga     c
CGU         --A           aucaa 

Annotation confidence Low

Genome context

CM000792.1: 150424946-150425005 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-30d

Mature ocu-miR-30d-5p

• Accession: MIMAT0048157
• Description: Oryctolagus cuniculus ocu-miR-30d-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCCCGACUGGAAGCU - 24
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-30d-3p

• Accession: MIMAT0048158
• Description: Oryctolagus cuniculus ocu-miR-30d-3p mature miRNA
• Sequence: 39 - CUUUCAGUCAGAUGUUUGCUGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344