miRBase entry: ocu-mir-28

Stem-loop ocu-mir-28


Accession
MI0039242
Description
Oryctolagus cuniculus ocu-mir-28 precursor miRNA


Sequence

AAGGAGCUCACAGUCUAUUGAGuugccauucugacuucccCACUAGAUUAUGAGCUCCUGGA
.(((((((((.((((((.((((((........))))....)).)))))).)))))))))...

Structure
--A         C      U  ----    gcc 
   AGGAGCUCA AGUCUA UG    AGuu   a
   ||||||||| |||||| ||    ||||    
   UCCUCGAGU UUAGAU AC    ucag   u
AGG         A      C  cccu    ucu 


Annotation confidence Not enough data
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Genome context
CM000803.1: 84299170-84299231 [+]

Database links

Mature ocu-miR-28-5p

Accession MIMAT0048141
Description Oryctolagus cuniculus ocu-miR-28-5p mature miRNA
Sequence 1 - AAGGAGCUCACAGUCUAUUGAG - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-28-3p

Accession MIMAT0048142
Description Oryctolagus cuniculus ocu-miR-28-3p mature miRNA
Sequence 41 - CACUAGAUUAUGAGCUCCUGGA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344