Stem-loop ocu-mir-27b

Accession

MI0039241

Description

Oryctolagus cuniculus ocu-mir-27b precursor miRNA

Sequence

AGAGCUUAGCUGAUUGGUGAACAgugauugguuuccgccuugUUCACAGUGGCUAAGUUCUGC
(((((((((((.((((.(((((((.....(((....)))))))))))))))))))))))))..

Structure

--           G    G       ugauu   u 
  AGAGCUUAGCU AUUG UGAACAg     ggu u
  ||||||||||| |||| |||||||     |||  
  UCUUGAAUCGG UGAC ACUUguu     ccg c
CG           -    -       -----   c 

Annotation confidence Not enough data

Genome context

CM000790.1: 74102379-74102441 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ocu-mir-27b

Mature ocu-miR-27b-5p

• Accession: MIMAT0048139
• Description: Oryctolagus cuniculus ocu-miR-27b-5p mature miRNA
• Sequence: 1 - AGAGCUUAGCUGAUUGGUGAACA - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-27b-3p

• Accession: MIMAT0048140
• Description: Oryctolagus cuniculus ocu-miR-27b-3p mature miRNA
• Sequence: 43 - UUCACAGUGGCUAAGUUCUGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344