Stem-loop ocu-mir-25

Accession

MI0039238

Description

Oryctolagus cuniculus ocu-mir-25 precursor miRNA

Literature search

1 open access papers mention ocu-mir-25
(1 sentences)

Sequence

AGGCGGAGACUUGGGCAAUUGCUggacgcugcccugggCAUUGCACUUGUCUCGGUCUGA
((((.(((((..(.(((((..((((........))))..))))).)..))))).))))..

Structure

--    G     UU G     UG    acg 
  AGGC GAGAC  G GCAAU  CUgg   c
  |||| |||||  | |||||  ||||    
  UCUG CUCUG  C CGUUA  gguc   u
AG    G     UU A     Cg    ccg 

Annotation confidence Not enough data

Genome context

GL018760.1: 103178-103237 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ocu-mir-25

Mature ocu-miR-25-5p

• Accession: MIMAT0048133
• Description: Oryctolagus cuniculus ocu-miR-25-5p mature miRNA
• Sequence: 1 - AGGCGGAGACUUGGGCAAUUGCU - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-25-3p

• Accession: MIMAT0048134
• Description: Oryctolagus cuniculus ocu-miR-25-3p mature miRNA
• Sequence: 39 - CAUUGCACUUGUCUCGGUCUGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344