miRBase entry: ocu-mir-9-1

Stem-loop ocu-mir-9-1


Accession
MI0039217
Description
Oryctolagus cuniculus ocu-mir-9-1 precursor miRNA

Literature search
1 open access papers mention ocu-mir-9-1
(72 sentences)

Sequence

UCUUUGGUUAUCUAGCUGUAUGAgugguguggagucuucAUAAAGCUAGAUAACCGAAAGUA
..(((((((((((((((.((((((.(.(....).).)))))).)))))))))))))))....

Structure
--UC               G      u g g 
    UUUGGUUAUCUAGCU UAUGAg g u u
    ||||||||||||||| |||||| | |  
    AAGCCAAUAGAUCGA AUAcuu u a g
AUGA               A      c g g 


Annotation confidence Not enough data
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Genome context
CM000802.1: 36488233-36488294 [+]

Database links

Mature ocu-miR-9-5p

Accession MIMAT0048095
Description Oryctolagus cuniculus ocu-miR-9-5p mature miRNA
Sequence 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
Evidence experimental
Illumina [1]

Mature ocu-miR-9-3p

Accession MIMAT0048096
Description Oryctolagus cuniculus ocu-miR-9-3p mature miRNA
Sequence 40 - AUAAAGCUAGAUAACCGAAAGUA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344