miRBase entry: ocu-mir-7a

Stem-loop ocu-mir-7a


Accession
MI0039216
Description
Oryctolagus cuniculus ocu-mir-7a precursor miRNA

Literature search
1 open access papers mention ocu-mir-7a
(2 sentences)

Sequence

UGGAAGACUAGUGAUUUUGUUGUUuuuagauaacuaaaucgaCAACAAAUCACAGUCUGCCAUA
(((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))..

Structure
--   A     A       U      --     a 
  UGG AGACU GUGAUUU GUUGUU  uuuag u
  ||| ||||| ||||||| ||||||  |||||  
  ACC UCUGA CACUAAA CAACag  aaauc a
AU   G     -       -      cu     a 


Annotation confidence Not enough data
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Genome context
GL018728.1: 1064317-1064380 [-]

Database links

Mature ocu-miR-7a-5p

Accession MIMAT0048093
Description Oryctolagus cuniculus ocu-miR-7a-5p mature miRNA
Sequence 1 - UGGAAGACUAGUGAUUUUGUUGUU - 24
Evidence experimental
Illumina [1]

Mature ocu-miR-7a-3p

Accession MIMAT0048094
Description Oryctolagus cuniculus ocu-miR-7a-3p mature miRNA
Sequence 43 - CAACAAAUCACAGUCUGCCAUA - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344