Stem-loop ocu-mir-1-2

Accession

MI0039215

Description

Oryctolagus cuniculus ocu-mir-1-2 precursor miRNA

Literature search

2 open access papers mention ocu-mir-1-2
(75 sentences)

Sequence

ACAUACUUCUUUAUGUACCCAUAugaacauacaaugcuaUGGAAUGUAAAGAAGUAUGUAU
((((((((((((((((..(((((..(........)..))))).))))))))))))))))..

Structure

--                AC     ug aca 
  ACAUACUUCUUUAUGU  CCAUA  a   u
  ||||||||||||||||  |||||  |    
  UGUAUGAAGAAAUGUA  GGUau  u   a
UA                -A     cg aac 

Annotation confidence Not enough data

Genome context

CM000798.1: 63183544-63183604 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-1-2

Mature ocu-miR-1-5p

• Accession: MIMAT0048091
• Description: Oryctolagus cuniculus ocu-miR-1-5p mature miRNA
• Sequence: 1 - ACAUACUUCUUUAUGUACCCAUA - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-1-3p

• Accession: MIMAT0048092
• Description: Oryctolagus cuniculus ocu-miR-1-3p mature miRNA
• Sequence: 40 - UGGAAUGUAAAGAAGUAUGUAU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344