Stem-loop ocu-let-7b

Accession

MI0039208

Description

Oryctolagus cuniculus ocu-let-7b precursor miRNA

Literature search

2 open access papers mention ocu-let-7b
(10 sentences)

Sequence

UGAGGUAGUAGGUUGUGUGGUUucagggcagcggugucgccccucagcagauaaCUAUACAGCCUACUGCCUUCCC
.(((((((((((((((((((((((((((..(((....))))))).....)).)))))))))))))))))))))...

Structure

--U                     -  -----    ca   g 
   GAGGUAGUAGGUUGUGUGGUU uc     aggg  gcg u
   ||||||||||||||||||||| ||     ||||  |||  
   UUCCGUCAUCCGACAUAUCaa ag     uccc  cgc g
CCC                     u  acgac    --   u 

Annotation confidence Not enough data

Genome context

GL018928.1: 74189-74264 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-let-7b

Mature ocu-let-7b-5p

• Accession: MIMAT0048078
• Description: Oryctolagus cuniculus ocu-let-7b-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUGUGGUU - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-let-7b-3p

• Accession: MIMAT0048079
• Description: Oryctolagus cuniculus ocu-let-7b-3p mature miRNA
• Sequence: 55 - CUAUACAGCCUACUGCCUUCCC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344