Stem-loop dno-mir-1197

Accession

MI0039182

Description

Dasypus novemcinctus dno-mir-1197 precursor miRNA

Sequence

CGGUUGACCAUGGUGUGUACGcuuuauuuaugccgUAGGACACAUGGUCUACUUCU
.(((.(((((((.(((.(((((.........).))))..)))))))))).)))...

Structure

--C   U       G   -G    - uuu 
   GGU GACCAUG UGU  UACG c   a
   ||| ||||||| |||  |||| |   u
   UCA CUGGUAC ACA  AUgc g   u
UCU   U       -   GG    c uau 

Annotation confidence Not enough data

Genome context

JH578221.1: 128018-128073 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from dno-mir-1197

Mature dno-miR-1197-5p

• Accession: MIMAT0048029
• Description: Dasypus novemcinctus dno-miR-1197-5p mature miRNA
• Sequence: 1 - CGGUUGACCAUGGUGUGUACG - 21
• Evidence: not_experimental

Mature dno-miR-1197-3p

• Accession: MIMAT0048030
• Description: Dasypus novemcinctus dno-miR-1197-3p mature miRNA
• Sequence: 36 - UAGGACACAUGGUCUACUUCU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344