Stem-loop dno-mir-653

Accession

MI0039161

Description

Dasypus novemcinctus dno-mir-653 precursor miRNA

Literature search

1 open access papers mention dno-mir-653
(1 sentences)

Sequence

UGUUGAAACAAUCUCUGGUGAGCuaagucccaagucauguUCACUGGAGUUUGUUUCAACACU
(((((((((((.(((((((((((...............))))))))))).)))))))))))..

Structure

--           U           uaaguc 
  UGUUGAAACAA CUCUGGUGAGC      c
  ||||||||||| |||||||||||      c
  ACAACUUUGUU GAGGUCACUug      a
UC           U           uacuga 

Annotation confidence Low

Genome context

JH574710.1: 688203-688265 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dno-mir-653

Mature dno-miR-653-5p

• Accession: MIMAT0047988
• Description: Dasypus novemcinctus dno-miR-653-5p mature miRNA
• Sequence: 1 - UGUUGAAACAAUCUCUGGUGAGC - 23
• Evidence: experimental ; Illumina [1]

Mature dno-miR-653-3p

• Accession: MIMAT0047989
• Description: Dasypus novemcinctus dno-miR-653-3p mature miRNA
• Sequence: 41 - UCACUGGAGUUUGUUUCAACACU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344