Stem-loop cpo-mir-12082

Accession

MI0038883

Description

Cavia porcellus cpo-mir-12082 precursor miRNA

Sequence

AAGCCAACCACAGACACCACAGAaaagauaaaucucucUGAUGGUGUCUUAGUUGCUUUC
((((.(((...((((((((((((..(((....))).)))).))))))))..)))))))..

Structure

--    C   CAC        -    aa   u 
  AAGC AAC   AGACACCA CAGA  aga a
  |||| |||   |||||||| ||||  |||  
  UUCG UUG   UCUGUGGU GUcu  ucu a
CU    -   -AU        A    -c   a 

Annotation confidence Not enough data

Genome context

DS562862.1: 45795923-45795982 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-12082

Mature cpo-miR-12082-5p

• Accession: MIMAT0047467
• Description: Cavia porcellus cpo-miR-12082-5p mature miRNA
• Sequence: 1 - AAGCCAACCACAGACACCACAGA - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-12082-3p

• Accession: MIMAT0047468
• Description: Cavia porcellus cpo-miR-12082-3p mature miRNA
• Sequence: 39 - UGAUGGUGUCUUAGUUGCUUUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344