Stem-loop cpo-mir-12080

Accession

MI0038881

Description

Cavia porcellus cpo-mir-12080 precursor miRNA

Sequence

UCGCUCUUUUCAGGACCUUUGCuguucugaggagcAAACGUCCUGAAAAGAGUGAGG
((((((((((((((((.((((((.((...)).)))))).))))))))))))))))..

Structure

--                C      g  c 
  UCGCUCUUUUCAGGAC UUUGCu uu  
  |||||||||||||||| |||||| || u
  AGUGAGAAAAGUCCUG AAAcga ga  
GG                C      g  g 

Annotation confidence Not enough data

Genome context

DS562856.1: 22962766-22962822 [+]

Mature cpo-miR-12080-5p

• Accession: MIMAT0047463
• Description: Cavia porcellus cpo-miR-12080-5p mature miRNA
• Sequence: 1 - UCGCUCUUUUCAGGACCUUUGC - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-12080-3p

• Accession: MIMAT0047464
• Description: Cavia porcellus cpo-miR-12080-3p mature miRNA
• Sequence: 36 - AAACGUCCUGAAAAGAGUGAGG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344