Stem-loop cpo-mir-12073

Accession

MI0038873

Description

Cavia porcellus cpo-mir-12073 precursor miRNA

Sequence

UUCAGAGUCGCUUGUCUCAUCCcgggggcaaccccuuguggcuaagaacaggAUGGGACGCGCAACUCUGUUUC
..((((((.((.((((((((((.((((....)))).(((........))))))))))))).)).))))))....

Structure

--UU      C  U          --------------c    g 
    CAGAGU GC UGUCUCAUCC               gggg c
    |||||| || ||||||||||               ||||  
    GUCUCA CG GCAGGGUAgg               cccc a
CUUU      A  C          acaagaaucgguguu    a 

Annotation confidence Not enough data

Genome context

DS562966.1: 952329-952402 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from cpo-mir-12073

Mature cpo-miR-12073-5p

• Accession: MIMAT0047447
• Description: Cavia porcellus cpo-miR-12073-5p mature miRNA
• Sequence: 1 - UUCAGAGUCGCUUGUCUCAUCC - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-12073-3p

• Accession: MIMAT0047448
• Description: Cavia porcellus cpo-miR-12073-3p mature miRNA
• Sequence: 53 - AUGGGACGCGCAACUCUGUUUC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344