Stem-loop cpo-mir-3059

Accession

MI0038866

Description

Cavia porcellus cpo-mir-3059 precursor miRNA

Sequence

UUUCCUCUCUGCCCCAUAGGGUGUagcucuaacugcCCUCUAGGGAAGAGAAGGUUGG
...(((((((..(((.(((((.((((......)))).)))))))).)))).)))....

Structure

-UUU   -    GC   A     U    cu 
    CCU CUCU  CCC UAGGG GUag  c
    ||| ||||  ||| ||||| ||||   
    GGA GAGA  GGG AUCUC cguc  u
GGUU   A    -A   -     C    aa 

Annotation confidence Not enough data

Genome context

DS562864.1: 13779749-13779806 [+]

Mature cpo-miR-3059-5p

• Accession: MIMAT0047433
• Description: Cavia porcellus cpo-miR-3059-5p mature miRNA
• Sequence: 1 - UUUCCUCUCUGCCCCAUAGGGUGU - 24
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-3059-3p

• Accession: MIMAT0047434
• Description: Cavia porcellus cpo-miR-3059-3p mature miRNA
• Sequence: 37 - CCUCUAGGGAAGAGAAGGUUGG - 58
• Evidence: not_experimental

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344