Stem-loop cpo-mir-1388

Accession

MI0038862

Description

Cavia porcellus cpo-mir-1388 precursor miRNA

Sequence

AGGACUGUCCAACCUGAGAAUGuugcaucuccuggucaAUCUCAGGUUUGUCAGCCCGUG
.((.(((.(.(((((((((...(((.(((....))))))))))))))).).))).))...

Structure

--A  A   U C         AUG   c   u 
   GG CUG C AACCUGAGA   uug auc c
   || ||| | |||||||||   ||| |||  
   CC GAC G UUGGACUCU   Aac ugg c
GUG  C   U U         ---   -   u 

Annotation confidence Not enough data

Genome context

DS562974.1: 424300-424359 [+]

Mature cpo-miR-1388-5p

• Accession: MIMAT0047425
• Description: Cavia porcellus cpo-miR-1388-5p mature miRNA
• Sequence: 1 - AGGACUGUCCAACCUGAGAAUG - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-1388-3p

• Accession: MIMAT0047426
• Description: Cavia porcellus cpo-miR-1388-3p mature miRNA
• Sequence: 39 - AUCUCAGGUUUGUCAGCCCGUG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344