Stem-loop cpo-mir-1379

Accession

MI0038861

Description

Cavia porcellus cpo-mir-1379 precursor miRNA

Sequence

UCAGGCUCUCAGCCCGAGCCguguucuucagacgggCACGGGCUGCAGCGCCAACGC
...(((.(((((((((.(((.((((.....))))))).))))))).)).))).....

Structure

--UCA   U  -       A   g    c 
     GGC CU CAGCCCG GCC uguu u
     ||| || ||||||| ||| |||| u
     CCG GA GUCGGGC Cgg gcag c
CGCAA   C  C       A   -    a 

Annotation confidence Not enough data

Genome context

DS562868.1: 2582941-2582997 [+]

Mature cpo-miR-1379-5p

• Accession: MIMAT0047423
• Description: Cavia porcellus cpo-miR-1379-5p mature miRNA
• Sequence: 1 - UCAGGCUCUCAGCCCGAGCC - 20
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-1379-3p

• Accession: MIMAT0047424
• Description: Cavia porcellus cpo-miR-1379-3p mature miRNA
• Sequence: 37 - CACGGGCUGCAGCGCCAACGC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344