Stem-loop cpo-mir-1301

Accession

MI0038859

Description

Cavia porcellus cpo-mir-1301 precursor miRNA

Sequence

GGUCACUCUAGGCACCGCAGCAcugugcuggggaugUUGCAGCUGCCUGGGAGUGACUUC
(((((((((((((((.((((((((.......)).)))))).).))))).)))))))))..

Structure

--         -     - C      -  gu 
  GGUCACUCU AGGCA C GCAGCA cu  g
  ||||||||| ||||| | |||||| ||  c
  UCAGUGAGG UCCGU G CGUUgu gg  u
CU         G     C A      a  gg 

Annotation confidence Not enough data

Genome context

DS562873.1: 7256957-7257016 [-]

Mature cpo-miR-1301-5p

• Accession: MIMAT0047419
• Description: Cavia porcellus cpo-miR-1301-5p mature miRNA
• Sequence: 1 - GGUCACUCUAGGCACCGCAGCA - 22
• Evidence: not_experimental

Mature cpo-miR-1301-3p

• Accession: MIMAT0047420
• Description: Cavia porcellus cpo-miR-1301-3p mature miRNA
• Sequence: 37 - UUGCAGCUGCCUGGGAGUGACUUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344