Stem-loop cpo-mir-1271

Accession

MI0038855

Description

Cavia porcellus cpo-mir-1271 precursor miRNA

Sequence

CUUGGCACCUAGUAAGCACUCAguaaauacuugaugAGUGCCUGCUAUGUGCCAGGCA
((((((((.(((((.(((((((.(((....))).))))))).))))).))))))))..

Structure

--        C     A       g   a 
  CUUGGCAC UAGUA GCACUCA uaa u
  |||||||| ||||| ||||||| |||  
  GGACCGUG AUCGU CGUGAgu guu a
AC        U     C       a   c 

Annotation confidence Not enough data

Genome context

DS562872.1: 22117662-22117719 [+]

Mature cpo-miR-1271-5p

• Accession: MIMAT0047411
• Description: Cavia porcellus cpo-miR-1271-5p mature miRNA
• Sequence: 1 - CUUGGCACCUAGUAAGCACUCA - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-1271-3p

• Accession: MIMAT0047412
• Description: Cavia porcellus cpo-miR-1271-3p mature miRNA
• Sequence: 37 - AGUGCCUGCUAUGUGCCAGGCA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344