Stem-loop cpo-mir-1193

Accession

MI0038850

Description

Cavia porcellus cpo-mir-1193 precursor miRNA

Sequence

UGGUAGACCGGUGACGUGCACUucauuuacgaUGUAGGUCACCCGUUUCACUAUC
((((((((.((((((.((((..((......)))))).)))))).)))).))))..

Structure

--    -    C      G    CU  au 
  UGGU AGAC GGUGAC UGCA  uc  u
  |||| |||| |||||| ||||  ||   
  AUCA UUUG CCACUG AUGU  ag  u
CU    C    C      G    --  ca 

Annotation confidence Not enough data

Genome context

DS562966.1: 1088694-1088748 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from cpo-mir-1193

Mature cpo-miR-1193-5p

• Accession: MIMAT0047401
• Description: Cavia porcellus cpo-miR-1193-5p mature miRNA
• Sequence: 1 - UGGUAGACCGGUGACGUGCACU - 22
• Evidence: not_experimental

Mature cpo-miR-1193-3p

• Accession: MIMAT0047402
• Description: Cavia porcellus cpo-miR-1193-3p mature miRNA
• Sequence: 33 - UGUAGGUCACCCGUUUCACUAUC - 55
• Evidence: not_experimental

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344